BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B10LP1|AL429694
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1468 1672 0.0
>3x_Contig1468
Length = 9852
Score = 1672 bits (843), Expect = 0.0
Identities = 863/868 (99%), Gaps = 2/868 (0%)
Strand = Plus / Plus
Query: 1 gtgcctctaatacaactgctggtacaggcgatgcaccaaaacctgcttttggaggtttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 gtgcctctaatacaactgctggtacaggcgatgcaccaaaacctgcttttggaggtttta 1305
Query: 61 acgcaaacgatgctgccagcaatgcgaacaataacaacagcaacaccacgaatacaagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 acgcaaacgatgctgccagcaatgcgaacaataacaacagcaacaccacgaatacaagcg 1365
Query: 121 casaaaaccaacatttggtggctttggctccgtagcgagncaggaagtagctcttcgcta 180
| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1366 c-caaaaccaacatttggtggctttggctccgtaga-aggcaggaagtagctcttcgcta 1423
Query: 181 tttggcgggtcgcaacaggctaaagacactcaacccaagagtggattctcatttggtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 tttggcgggtcgcaacaggctaaagacactcaacccaagagtggattctcatttggtaca 1483
Query: 241 caacctgaacaaaagaccgatgcaaagcccgcttttaatttcggactatctggaaataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 caacctgaacaaaagaccgatgcaaagcccgcttttaatttcggactatctggaaataat 1543
Query: 301 gcaatgactacaactccgagtgtcaatgcctctaaaccaatatttggtgccaatacaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 gcaatgactacaactccgagtgtcaatgcctctaaaccaatatttggtgccaatacaact 1603
Query: 361 tcaacatcaagcttcacaacttccgctaaaccaactgaaacctcgaaacctaatacaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 tcaacatcaagcttcacaacttccgctaaaccaactgaaacctcgaaacctaatacaaat 1663
Query: 421 gccacatcactctttggtgggaaccacactgatacaaaaccagccggtgctacttcaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 gccacatcactctttggtgggaaccacactgatacaaaaccagccggtgctacttcaggg 1723
Query: 481 ttcaactttggttctgccgctggagatgccaacaagccaagtttttcgctaagtctggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 ttcaactttggttctgccgctggagatgccaacaagccaagtttttcgctaagtctggga 1783
Query: 541 tcaaaacctgaagaaaaaacctcaggcgcaaagacaggattctcatttggttcaaaaacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 tcaaaacctgaagaaaaaacctcaggcgcaaagacaggattctcatttggttcaaaaacg 1843
Query: 601 gaggacaagcctacagatgctaaaccagcattttctttcggagcaaagccctctgggaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1844 gaggacaagcctacagatgctaaaccagcattttctttcggagcaaagccctctgggaca 1903
Query: 661 gaacaagccggtaagccagccttcagctttggatcaaaaccagtggctcctgaaccctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1904 gaacaagccggtaagccagccttcagctttggatcaaaaccagtggctcctgaaccctct 1963
Query: 721 aaaccttccaatgacaaaccagaaagtaaacagggttttgcattcaatgttaaatctggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1964 aaaccttccaatgacaaaccagaaagtaaacagggttttgcattcaatgttaaatctggc 2023
Query: 781 aacagtaaagaggagaccaaaagtggattttctctgggatctaaaacagaagaatctaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2024 aacagtaaagaggagaccaaaagtggattttctctgggatctaaaacagaagaatctaaa 2083
Query: 841 cctgcctctaaaatgggattttctctgg 868
||||||||||||||||||||||||||||
Sbjct: 2084 cctgcctctaaaatgggattttctctgg 2111
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5775
Number of Sequences: 1807
Number of extensions: 5775
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)